Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015848762.1_cds_XP_016510529.1_23358
CDS Infomation

[gene=LOC107827832] [db_xref=GeneID:107827832] [protein=pre-rRNA-processing protein las1 isoform X2] [protein_id=XP_016510529.1] [location=join(207754..207788,208471..208577,209039..209094,211501..211660,212805..212876,213498..213791,215425..216299)] [gbkey=CDS]
Sequence

ATGCTTTCTATGCTATATTGCATGGCAATTATGAGGCTTGTAAATGGCGTTGTTGAGAAG
ACCCGCAAGAAGACAGAAATCTCAATAGGTGAAGCAGCCAATGATATTGGAATTCCACGT
ATGTTGATTGATGTTCGCCATGAGGGCTCTCATCGTGATCTTCCTTCACTGCAATTGGTC
CATCTTGCCTCTACCAAGGCACTTGACTGGTTGAAATCATATTATTGGGAACCTCAAAGC
AAAGCAATTCGAAGGGATCCAACAGCCAATCTGAGGAAAGAAATCAAACACAGATTACTA
GAGATGGCTTCCTTATTGGAAATGAAGCAGACTACCAGATCGAGTACTTCAGAAAAGCGA
ATCAGACTGGCGCAGCTTTGTGCAAGAAACAAGTTTCTCCCTGTCACCTCTGGGTTGCTA
CCATGTTCTGGTTCTAAGAAACAGATTACCAGAGCTACCAAAGCCGTTCTACGATTATAT
ACTTCCTCTTCTTCCGAAGTGATATCTGTGCTTTTGGAACTTATGCTGCAGCCATTAGAT
TCCCCAAATGGGGAGTTGGTGAATGCTTTGAAATTCCATGGAATCATTGACAGCCAAAGT
GCATATGATTATTGGAAACCAATACTGAAAAAACTGTCAAATAGAGAACCAGAGTTGCTT
CTGACTCTTCTGCAGGCAGCTCTTGACAAAATCGAGACTTTGGAGGCCATGAAATATGAA
CTTGGTGAAAATTGCTTTTTAGAAAATGAAAATGAATCTCTCCGAATTCAACTATTATTC
TATCTGTGTGAAGAGGTAGTTGGAAATCTGAAGACACTGAAGCCTCTTAACCGTAGTGAT
TCTGCTGCTGACAGGGAAGATTCTTCAAGAAAACTTGGTCTTCCAGAGGCAACGCTGCAA
CAAATATTACGTAAATGTTTACTTTTGTCCTCTCACACCAATAATCAGCTGATGGATTCA
GCTCTGGTCATTGCTCAGATTATGGGAAGGAGTTCTTTATTCCATAAGTTAAATAAGCTC
TGCTCACTGAGCGTATTTGATTCAGAGATTATTCACTCGGATCCTTTCACCAATATTTCG
GAAAGCTTCCTACTATCCAGGGGGGAAGATTCTCTTCGCCAGGCTGCTCAGAAGCTAGAA
CTAATTAAGTGCCGAGTTGTGAAGGGCAATAACGTGAAGACAGCAGATGCCGGGAGCAGA
TGGGTAGTTGCAGAAGCATGGAAACCATGCCCCATTGGTATGCTGCCCCATACATTTGGT
TCTACTGGCCGCCTTCCGATTCTTGATTTTGTTGATGATTCAGCAGAAGTTGCAAAATCA
TCCGACAATGAAATCCCAGAAACTGATAAATGTGGATGCAAGCGGGATGCTTCCTCTGCG
ATTGAATGCTTGGACGACCATCCTAGTATTAAGAAAATGAGGAAGACAGAGGAGCCTGGT
GATAGCAACAACGACAGGGATTCTCTCTCGGATAAAAATGGCAACGACGACATGCCTTTG
GAAGGTTCAAAAGGCCACCTGCTGATTGGTGGAGTCTGGAAAAAGGTTTCAACGGAGGAG
CTGCAAGATATTGCAAGATCTGTGAAGATTTTGATTTAA

Peptide Sequence

PEP ID

XP_016510529.1
PEP Infomation

PREDICTED: pre-rRNA-processing protein las1 isoform X2 [Nicotiana tabacum]
Sequence

MLSMLYCMAIMRLVNGVVEKTRKKTEISIGEAANDIGIPRMLIDVRHEGSHRDLPSLQLV
HLASTKALDWLKSYYWEPQSKAIRRDPTANLRKEIKHRLLEMASLLEMKQTTRSSTSEKR
IRLAQLCARNKFLPVTSGLLPCSGSKKQITRATKAVLRLYTSSSSEVISVLLELMLQPLD
SPNGELVNALKFHGIIDSQSAYDYWKPILKKLSNREPELLLTLLQAALDKIETLEAMKYE
LGENCFLENENESLRIQLLFYLCEEVVGNLKTLKPLNRSDSAADREDSSRKLGLPEATLQ
QILRKCLLLSSHTNNQLMDSALVIAQIMGRSSLFHKLNKLCSLSVFDSEIIHSDPFTNIS
ESFLLSRGEDSLRQAAQKLELIKCRVVKGNNVKTADAGSRWVVAEAWKPCPIGMLPHTFG
STGRLPILDFVDDSAEVAKSSDNEIPETDKCGCKRDASSAIECLDDHPSIKKMRKTEEPG
DSNNDRDSLSDKNGNDDMPLEGSKGHLLIGGVWKKVSTEELQDIARSVKILI

Transcript Sequence

Gene sequence data has not been registered.